Published peer-reviewed articles and in press

• Calore, E., Gabbana, A., Kraus, J., Schifano, S. F. & Tripiccione, R. (2016) Performance and portability of accelerated lattice Boltzmann applications with OpenACC. Concurrency and Computation: Practice and Experience, 28, 3485–3502. arXiv: 1703.00186.
  
  
• Calore, E., Gabbana, A., Kraus, J., Pellegrini, E., Schifano, S. & Tripiccione, R. (2016) Massively parallel lattice–Boltzmann codes on large GPU clusters. Parallel Computing, 58, 1–24. arXiv: 1703.00185.
  
  
• Alexandrou, C., Bacchio, S., Finkenrath, J., Frommer, A., Kahl, K. & Rottmann, M. (2016) Adaptive aggregation-based domain decomposition multigrid for twisted mass fermions. Physical Review D, 94, 114509. arXiv: 1610.02370.
  
  
• Li, J., Lyu, W., Rossetti, G., Konijnenberg, A., Natalello, A., Ippoliti, E., Orozco, M., Sobott, F., Grandori, R. & Carloni, P. (2017) Proton dynamics in protein mass spectrometry. The Journal of Physical Chemistry Letters, 8, 1105–1112. arXiv: 1702.07929.
  
  
• Calore, E., Gabbana, A., Schifano, S. F. & Tripiccione, R. (2017) Evaluation of DVFS techniques on modern HPC processors and accelerators for energy-aware applications. Concurrency and Computation: Practice and Experience. Published Online 29 Mar 2017. arXiv: 1703.02788.
  
  
• Calore, E., Gabbana, A., Schifano, S. F. & Tripiccione, R. (2017) Optimization of lattice Boltzmann simulations on heterogeneous computers. The International Journal of High Performance Computing Applications. In press March 2017. arXiv: 1703.04594.
  
  
• Gabbana, A., Mendoza, M., Succi, S. & Tripiccione, R. (2017) Towards a unified lattice kinetic scheme for relativistic hydrodynamics. Physical Review E. 95, 053304. arXiv: 1703.04605.

• Alexandrou, C., Cichy, K., Constantinou, M., Hadjiyiannakou, K., Jansen, K., Steffens, F. & Wiese, C. (2017) New lattice results for parton distributions. Phys. Rev. D. 96, 014513.  arXiv: 1610.03689.

• Liu, L., Bacchio, S., Dimopoulos, P., Finkenrath, J., Frezzotti, R., Helmes, C., Jost, C., Knippschild, B., Kostrzewa, B., Liu, H., Ottnad, K., Petschlies, M., Urbach, C. & Werner, M. (2017) Isospin-0 ππ s-wave scattering length from twisted mass lattice QCD. Physical Review D. 96, 054516. arXiv: 1612.02061.

• Thomas Tarenzi, Vania Calandrini, Raffaello Potestio, Alejandro Giorgetti, and Paolo Carloni. (2017) Open Boundary Simulations of Proteins and Their Hydration Shells by Hamiltonian Adaptive Resolution Scheme. J. Chem. Theory Comput., 13 (11), pp 5647–5657, arXiv:1711.05613

• Gabbana, A., Mendoza, M., Succi, S. & Tripiccione, R. (2017) Kinetic approach to relativistic dissipation. Physical Review E. 96, 023305. arXiv: 1704.02523

• Milan, F., Biferale, L., Sbragaglia, M. and Toschi, F.  Lattice Boltzmann simulations of droplet dynamics in time-dependent flows. Eur. Phys. J. E (2018) 41: 6. arXiv:1711.05498

Articles in conference proceedings

• Leskovec, L., Alexandrou, C., Koutsou, G., Meinel, S., Negele, J. W., Paul, S., Petschlies, M., Pochinsky, A., Rendon, G. & Syritsyn, S. (2016) A study of the radiative transition ππ → πγ^∗ with lattice QCD. In: PoS (LATTICE2016), 159 (7 pages). arXiv: 1611.00282.
  
  
• Liu, L., Bacchio, S., Dimopoulos, P., Finkenrath, J., Frezzotti, R., Helmes, C., Jost, C., Knippschild, B., Kostrzewa, B., Liu, H., Ottnad, K., Petschlies, M., Urbach, C. & Werner, M. (2016) Isospin-0 ππ scattering from twisted mass lattice QCD. In: PoS (LATTICE2016), 119 (7 pages). arXiv: 1701.08961.
  
  
• Bacchio, S., Alexandrou, C., Finkenrath, J., Frommer, A., Kahl, K. & Rottmann, M. (2016) DDalphaAMG for twisted mass fermions. In: PoS (LATTICE2016), 259 (7 pages). arXiv: 1611.01034.
  
  
• Korzec, T., Knechtli, F., Calì, S., Leder, B. & Moir, G. (2016) Impact of dynamical charm quarks. In: PoS (LATTICE2016), 126 (7 pages). arXiv: 1612.07634.
  
  
• Alexandrou, C., Constantinou, M., Hadjiyiannakou, K., Kallidonis, C., Koutsou, G., Jansen, K., Wiese, C. & Vaquero Avilés-Casco, A. (2016) Nucleon spin and quark content at the physical point. In: PoS (LATTICE2016), 153 (7 pages). arXiv: 1611.09163.
  
  
• Alexandrou, C., Cichy, K., Constantinou, M., Hadjiyiannakou, K., Jansen, K., Steffens, F. & Wiese, C. (2016) Parton distributions from lattice QCD with momentum smearing. In: PoS (LATTICE2016), 151 (7 pages). arXiv: 1612.08728.

Articles submitted and in preparation

• Lyu, W., Rossetti, G., Christophides, G., Natile, G., Arnesano, F. & Carloni, P. Effect of post-translational modifications of HMGB1 box-A on the interface of cisplatin-DNA adducts. In preparation.
  
  
• Brockman, A., MacCallum, R. & Christophides, G. HPC DREME for unsupervised multi-species Cis regulatory element detection. In preparation.
  
  
• Tarenzi, T., Calandrini, V., Potestio, R., Giorgetti, A. & Carloni, P. Multiscale simulation approach for accurate drug affinity predictions using low-resolution protein models. In preparation.
  
  
• Gupta, A., Belardinelli, D., Sbragaglia, M., Xue, X. and Toschi, F. (2017) Effects of thermal fluctuations in geometry mediated droplet break-up: a Lattice Botlzmann Study. In preparation.

• Tauzin, G., Biferale, L., Sbragaglia, M., Gupta, A., Toschi, F., Bartel, A. & Ehrhardt, M. (2017) Implicit sub-grid scale modeling within Entropic Lattice Boltzmann: Lessons from the 2D case. In preparation.

• C. Alexandrou, S. Bacchio, P. Dimopoulos, J. Finkenrath, R. Frezzotti, K. Jansen, B. Kostrzewa, M. Mangin-Brinet, F. Sanfilippo, S. Simula, C. Urbach,U. Wenger.(2017) "The pion vector form factor from Lattice QCD at the physical point. submitted to Phys. Rev., D, arxiv:1710.10401.